| Arock Diversion Dam | Malheur, OR | 3.6 miles | SE |
| Rock Creek Dam | Malheur, OR | 5.8 miles | SE |
| Palmer Dam | Malheur, OR | 9 miles | NE |
| Greenley Dam | Malheur, OR | 9.1 miles | SE |
| Skinner Dam | Malheur, OR | 10.9 miles | NE |
| Sommerville Dam | Malheur, OR | 11.7 miles | SE |
| Scott Dam | Malheur, OR | 11.9 miles | SW |
| Antelope Dam | Malheur, OR | 12.3 miles | SE |
| Parks Dam | Malheur, OR | 12.8 miles | NE |
| Rock House Dam | Malheur, OR | 15.5 miles | SW |
| Blevins Dam | Malheur, OR | 16.3 miles | SW |
| Deary Dam | Malheur, OR | 18.3 miles | SE |
| Parsnip Creek Diversion Dam | Malheur, OR | 18.9 miles | SE |
| Parsnip Dam | Malheur, OR | 19.4 miles | SE |
| Jaca Dam | Malheur, OR | 20.2 miles | SE |
| Rock Dam | Malheur, OR | 21.2 miles | NW |
| Clark Dam Number 1 | Malheur, OR | 21.5 miles | NW |
| Clark Dam Number 2 | Malheur, OR | 21.8 miles | NW |
| Ruby Dam | Malheur, OR | 22.4 miles | SW |
| Anderson Dam | Malheur, OR | 23.1 miles | SW |
| Cheyally Dam | Malheur, OR | 23.2 miles | NE |
| Arritola Dam | Malheur, OR | 24 miles | SE |
| Lone Tree Dam | Owyhee, ID | 24.1 miles | SE |
| Salt Lick Dam | Malheur, OR | 25.4 miles | SE |
| Black Canyon Creek Dam | Malheur, OR | 26 miles | NW |
| G A Parker Dam | Malheur, OR | 28.4 miles | SE |
| Stimmel Dam | Malheur, OR | 29.7 miles | SE |
| David Kent Dam | Malheur, OR | 29.8 miles | NW |
| Hardesty-Cherry Creek Dam | Owyhee, ID | 30.1 miles | SE |
| Pershall Dam | Owyhee, ID | 30.4 miles | SE |
| Texas Basin Dam | Owyhee, ID | 31.4 miles | NE |
| Foland Dam | Owyhee, ID | 32.1 miles | SE |
| Hardisty and Wilson Dam | Owyhee, ID | 32.5 miles | SE |
| Juniper Creek Dam | Owyhee, ID | 33.7 miles | SE |
| Delamar Tailings Dam | Owyhee, ID | 33.7 miles | NE |
| Corless Dam | Malheur, OR | 34.2 miles | NW |
| Crowley Dam | Malheur, OR | 35.5 miles | NW |
| Brown Dam | Owyhee, ID | 36.4 miles | NE |
| King Dam | Owyhee, ID | 36.5 miles | NE |
| Butte Dam | Malheur, OR | 37.9 miles | NW |
| Maher Dam | Malheur, OR | 40.1 miles | SE |
| Pole Creek Dam | Malheur, OR | 41.6 miles | SE |
| Josephine Creek Dam | Owyhee, ID | 42 miles | SE |
| Star Creek Dam | Malheur, OR | 42.5 miles | NW |
| Spencer Dam | Owyhee, ID | 42.9 miles | SE |
| A E Brown Dam | Harney, OR | 43.8 miles | NW |
| Tyson Dam | Owyhee, ID | 43.9 miles | NE |
| Nettleton Dam | Owyhee, ID | 44.8 miles | SE |
| Rock Creek Dam | Owyhee, ID | 44.9 miles | SE |
| Louisa Creek Dam | Owyhee, ID | 45.3 miles | SE |
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